BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017D08SP1|AL427157
(992 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig567 1410 0.0
3x_Contig1475 153 7e-37
>3x_Contig567
Length = 1913
Score = 1410 bits (710), Expect = 0.0
Identities = 712/714 (99%)
Strand = Plus / Plus
Query: 1 gaagacgaattattttttaagaagacatggacaaccgttatgctagataaaactaacaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1200 gaagacgaattattttttaagaagacatggacaaccgttatgctagataaaactaacaaa 1259
Query: 61 tcgaattcgtaagawacattagccctgtgcttttctgaaatataawagcacagcttctta 120
|||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1260 tcgaattcgtaagaaacattagccctgtgcttttctgaaatataaaagcacagcttctta 1319
Query: 121 cttctgacctagttgtcattacgcatttctttttttcacgtcttcttatatctattctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1320 cttctgacctagttgtcattacgcatttctttttttcacgtcttcttatatctattctgg 1379
Query: 181 tcttaacaatacaaaatgctacaaattttgcaaagcatgcataaaagagaaatatgaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1380 tcttaacaatacaaaatgctacaaattttgcaaagcatgcataaaagagaaatatgaaga 1439
Query: 241 ccctagtggtagggggttaccaaagcgtcaaaattcatatagtggttctcgccggacatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1440 ccctagtggtagggggttaccaaagcgtcaaaattcatatagtggttctcgccggacatt 1499
Query: 301 aatcatactatattcagattagttttgaagacagttctgatacattgccgattcaacaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1500 aatcatactatattcagattagttttgaagacagttctgatacattgccgattcaacaaa 1559
Query: 361 ctatagtacttttcaaagtgattatttcaccgaaatttttaacatacagtaagactcaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1560 ctatagtacttttcaaagtgattatttcaccgaaatttttaacatacagtaagactcaat 1619
Query: 421 gggcaccaagtctaaggagattccacctgattctccttatgcaagggatgatttccattc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1620 gggcaccaagtctaaggagattccacctgattctccttatgcaagggatgatttccattc 1679
Query: 481 tttaagtgtgtcccgagtggaaacgctgttatccacacatattaaccagggattgaacac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1680 tttaagtgtgtcccgagtggaaacgctgttatccacacatattaaccagggattgaacac 1739
Query: 541 tacacaaatcgcggaaagattgggtctaataggtgaaaatactcttggggatgattcaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1740 tacacaaatcgcggaaagattgggtctaataggtgaaaatactcttggggatgattcaaa 1799
Query: 601 aattaatattaagggcattttcattagtcaaatatgtaatgccatgattatggtgttgat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1800 aattaatattaagggcattttcattagtcaaatatgtaatgccatgattatggtgttgat 1859
Query: 661 aatttcaatggtcatctcgttcgccatcaaagactggatttctggtggtgtgat 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1860 aatttcaatggtcatctcgttcgccatcaaagactggatttctggtggtgtgat 1913
>3x_Contig1475
Length = 10676
Score = 153 bits (77), Expect = 7e-37
Identities = 217/263 (82%), Gaps = 1/263 (0%)
Strand = Plus / Minus
Query: 731 atcaacgttgttataggtgcatatcaagaatataacgcctcgaagacaatgaactcattg 790
|||||||| || || |||||||||||||||||||| || || |||||||||||||| |||
Sbjct: 10645 atcaacgtcgtcatcggtgcatatcaagaatataatgcttctaagacaatgaactcgttg 10586
Query: 791 aaatcactatccactccgtcggcccatgttatcagggctggtaatgatcttacaatcgag 850
||||| ||||||||||| || || || |||||||| | ||||||||| | || || |
Sbjct: 10585 aaatcgctatccactccatctgctcacgttatcagagatggtaatgacatcaccattcaa 10526
Query: 851 tcaaaagaattggtgcctggtgatatctgtattattagggttggcgatacagtaccggcc 910
||||| ||||| ||||| |||||||| ||||| |||| ||| || || || || |||||
Sbjct: 10525 tcaaaggaattagtgccgggtgatatttgtatcattaaggtcggtgacaccgtgccggca 10466
Query: 911 gatttgaggctattcgaagcaataaatttggaaacagatgaggcgctattgactggtgaa 970
|||||||| || || ||| |||| ||||||||||||||||| || |||| |||||||||
Sbjct: 10465 gatttgagactcttggaatcaattaatttggaaacagatgaagccttattaactggtgaa 10406
Query: 971 tc-cytccagttgctaagtctca 992
|| | |||||| || ||||||||
Sbjct: 10405 tcgcttccagtcgccaagtctca 10383
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7624
Number of Sequences: 1807
Number of extensions: 7624
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 2
length of query: 992
length of database: 10,358,551
effective HSP length: 16
effective length of query: 976
effective length of database: 10,329,639
effective search space: 10081727664
effective search space used: 10081727664
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)